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Measurements on fungal growth and contamination across several timepoints.

Usage

fungal_growth

Format

A tibble with 990 rows and 8 variables

id_treatment

Identifier for the experimental treatment unit; joins to experiment_setup and experiment_endpoint.

date

Date of the growth observation measurement.

dpi

Days post inoculation; days elapsed between this measurement and the first measurement for this treatment.

area_size

Area of fungal mycelium at the observation date.

nr_contaminations

Number of macroscopically distinct contaminating fungi observed at this timepoint.

total_contamination_area

Total area of contamination summed across all observed contamination spots at this timepoint.

reproductive_structures

Coded indicator of reproductive structures observed at this timepoint.

growth_description

Coded description of fungal growth at this timepoint; numeric score recorded during observation.